antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 04:12:04 pm
Annotation id: 267372
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Emerald
v0.2.4.1
Date: May 22, 2023 04:12:05 pm
Annotation id: 267423
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CDDSearch
Date: May 22, 2023 04:12:05 pm
Annotation id: 267489
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InterProScan
Date: May 22, 2023 04:12:05 pm
Annotation id: 267426
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Comments (1 post)
SMC Bot May 22, 2023 04:12:04 pm
FlaggedHidden
This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:
[
{
"SequenceID/Contig": "NC_009380.1",
"start": "2950657",
"end": "3266222",
"annotation_tool": "EMERALDv0.2.4.1",
"ID": "NC_009380.1_emrld_9",
"nearest_MiBIG": "BGC0000150",
"nearest_MiBIG_class": "NRP Polyketide",
"nearest_MiBIG_diceDistance": "0.474",
"score": "0.860",
"partial": "00"
},
{
"SequenceID/Contig": "NC_009380.1",
"start": "2960959",
"end": "3010957",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "14",
"contig_edge": "False",
"product": "T1PKS,NRPS",
"region_number": "12",
"rules": "cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)),cds(Condensation and (AMP-binding or A-OX))",
"tool": "antismash"
},
{
"SequenceID/Contig": "NC_009380.1",
"start": "3012687",
"end": "3092465",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "15,16,17",
"contig_edge": "False",
"product": "T1PKS,NRPS-like",
"region_number": "13",
"rules": "cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)),cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))",
"tool": "antismash"
},
{
"SequenceID/Contig": "NC_009380.1",
"start": "3098059",
"end": "3255509",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "18,19,20,21,22",
"contig_edge": "False",
"product": "T1PKS,RRE-containing,arylpolyene,NRPS",
"region_number": "14",
"rules": "cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)),minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]),(APE_KS1 or APE_KS2),cds(Condensation and (AMP-binding or A-OX))",
"tool": "antismash"
}
]
Comments (1 post)
SMC Bot
May 22, 2023 04:12:04 pm
Flagged Hidden
This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format: