antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 04:12:01 pm
Annotation id: 267225
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Emerald
v0.2.4.1
Date: May 22, 2023 04:12:01 pm
Annotation id: 267232
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CDDSearch
Date: May 22, 2023 04:12:01 pm
Annotation id: 267236
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InterProScan
Date: May 22, 2023 04:12:01 pm
Annotation id: 267234
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Comments (2 posts)
SMC Bot May 22, 2023 04:12:01 pm
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This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:
[
{
"SequenceID/Contig": "NC_009380.1",
"start": "1131285",
"end": "1180343",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "4",
"contig_edge": "False",
"product": "transAT-PKS-like,NRPS-like,T1PKS",
"region_number": "4",
"rules": "cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS) and not PKS_AT),cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX)),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
},
{
"SequenceID/Contig": "NC_009380.1",
"start": "1133454",
"end": "1243806",
"annotation_tool": "EMERALDv0.2.4.1",
"ID": "NC_009380.1_emrld_3",
"nearest_MiBIG": "BGC0001041",
"nearest_MiBIG_class": "NRP Polyketide",
"nearest_MiBIG_diceDistance": "0.313",
"score": "0.930",
"partial": "00"
}
]
Comments (2 posts)
SMC Bot
May 22, 2023 04:12:01 pm
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This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:
Daniel Udwary
Aug 23, 2023 05:49:09 pm
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This is the Salinosporamide A BGC