SMC
Version: 1.2.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Saccharide
Source Info
Source: Candidatus Methanomethylophilaceae archaeon - tax_id: 2517205 (SMC-1359216)
Location: CAVIDS010000004.1: 2-15273 (15,271 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

Emerald
v0.2.4.1
Date: Aug 22, 2024 02:54:33 pm

Annotation id: 61848914 download GFF for this track

Hide

CDDSearch
Date: Aug 22, 2024 02:54:33 pm

Annotation id: 61848916 download GFF for this track

Hide

InterProScan
Date: Aug 22, 2024 02:54:33 pm

Annotation id: 61848915 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Aug 22, 2024 02:54:33 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "CAVIDS010000004.1",
    "start": "2",
    "end": "15273",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "CAVIDS010000004.1_emrld_1",
    "nearest_MiBIG": "BGC0000773",
    "nearest_MiBIG_class": "Saccharide",
    "nearest_MiBIG_diceDistance": "0.544",
    "score": "0.520",
    "partial": "10"
  }
]
 
 

   login to post or reply to a comment