SMC
Version: 1.2.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Aryl polyene, Polyketide
Source Info
Source: Methanobacteriaceae archaeon - tax_id: 2099680 (SMC-1359215)
Location: CAVIBN010000280.1: 1-4208 (4,207 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

GenBank
Date: Aug 22, 2024 02:54:31 pm

Annotation id: 61848909 download GFF for this track

Hide

antiSMASH
v7.1.0
Date: Aug 22, 2024 02:54:31 pm

Annotation id: 61848905 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: Aug 22, 2024 02:54:31 pm

Annotation id: 61848906 download GFF for this track

Hide

CDDSearch
Date: Aug 22, 2024 02:54:31 pm

Annotation id: 61848908 download GFF for this track

Hide

InterProScan
Date: Aug 22, 2024 02:54:31 pm

Annotation id: 61848907 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Aug 22, 2024 02:54:31 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "CAVIBN010000280.1",
    "start": "1",
    "end": "4208",
    "annotation_tool": "antiSMASHv7.1.0",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "arylpolyene",
    "region_number": "1",
    "rules": "(APE_KS1 or APE_KS2)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "CAVIBN010000280.1",
    "start": "3",
    "end": "4050",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "CAVIBN010000280.1_emrld_1",
    "nearest_MiBIG": "BGC0000228",
    "nearest_MiBIG_class": "Polyketide",
    "nearest_MiBIG_diceDistance": "0.333",
    "score": "0.490",
    "partial": "11"
  }
]

 
 

   login to post or reply to a comment