SMC
Version: 1.2.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Polyketide, T1PKS
Source Info
Source: uncultured Candidatus Poseidoniales archaeon - tax_id: 274854 (SMC-1359732)
Location: CAXHEV010000019.1: 1-26320 (26,319 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

GenBank
Date: Aug 22, 2024 02:22:53 pm

Annotation id: 61846489 download GFF for this track

Hide

antiSMASH
v7.1.0
Date: Aug 22, 2024 02:22:53 pm

Annotation id: 61846485 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: Aug 22, 2024 02:22:53 pm

Annotation id: 61846486 download GFF for this track

Hide

CDDSearch
Date: Aug 22, 2024 02:22:53 pm

Annotation id: 61846488 download GFF for this track

Hide

InterProScan
Date: Aug 22, 2024 02:22:53 pm

Annotation id: 61846487 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Aug 22, 2024 02:22:53 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "CAXHEV010000019.1",
    "start": "1",
    "end": "26320",
    "annotation_tool": "antiSMASHv7.1.0",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "T1PKS",
    "region_number": "1",
    "rules": "cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "CAXHEV010000019.1",
    "start": "12",
    "end": "26320",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "CAXHEV010000019.1_emrld_1",
    "nearest_MiBIG": "BGC0000284",
    "nearest_MiBIG_class": "Polyketide",
    "nearest_MiBIG_diceDistance": "0.538",
    "score": "0.940",
    "partial": "11"
  }
]

 
 

   login to post or reply to a comment