SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Saccharide
Source Info
Source: Pantoea ananatis LMG 20103 - tax_id: 706191 (SMC-1165303)
Location: NC_013956: 2337977-2342985 (5,008 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

IMG
Date: Oct 20, 2023 10:11:44 am

Annotation id: 52623565 download GFF for this track

Hide

antiSMASH
v7.0.0beta1-67b538a9
Date: Oct 20, 2023 10:11:44 am

Annotation id: 52623556 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: Oct 20, 2023 10:11:44 am

Annotation id: 52623559 download GFF for this track

Hide

CDDSearch
Date: Oct 20, 2023 10:11:44 am

Annotation id: 52623564 download GFF for this track

Hide

InterProScan
Date: Oct 20, 2023 10:11:44 am

Annotation id: 52623561 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Oct 20, 2023 10:11:44 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NC_013956",
    "start": "2337977",
    "end": "2342985",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NC_013956_emrld_5",
    "nearest_MiBIG": "BGC0000754",
    "nearest_MiBIG_class": "Saccharide",
    "nearest_MiBIG_diceDistance": "0.481",
    "score": "0.440",
    "partial": "00"
  }
]
 
 

   login to post or reply to a comment