SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Other, NI-siderophore
Source Info
Source: Pantoea ananatis LMG 20103 - tax_id: 706191 (SMC-1165303)
Location: NC_013956: 726780-741175 (14,395 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

IMG
Date: Oct 20, 2023 10:11:43 am

Annotation id: 52623526 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: Oct 20, 2023 10:11:43 am

Annotation id: 52623521 download GFF for this track

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Emerald
v0.2.4.1
Date: Oct 20, 2023 10:11:43 am

Annotation id: 52623522 download GFF for this track

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CDDSearch
Date: Oct 20, 2023 10:11:43 am

Annotation id: 52623525 download GFF for this track

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InterProScan
Date: Oct 20, 2023 10:11:43 am

Annotation id: 52623523 download GFF for this track

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Comments (1 post)


SMC Bot
Oct 20, 2023 10:11:43 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NC_013956",
    "start": "726780",
    "end": "741175",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NC_013956_emrld_4",
    "nearest_MiBIG": "BGC0001870",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.429",
    "score": "0.840",
    "partial": "00"
  },
  {
    "SequenceID/Contig": "NC_013956",
    "start": "728557",
    "end": "740908",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "3",
    "contig_edge": "False",
    "product": "NRPS-independent-siderophore",
    "region_number": "3",
    "rules": "IucA_IucC",
    "tool": "antismash"
  }
]
 
 

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