SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Saccharide
Source Info
Source: Pantoea ananatis LMG 20103 - tax_id: 706191 (SMC-1165303)
Location: NC_013956: 168252-185348 (17,096 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

IMG
Date: Oct 20, 2023 10:11:42 am

Annotation id: 52623498 download GFF for this track

Hide

antiSMASH
v7.0.0beta1-67b538a9
Date: Oct 20, 2023 10:11:42 am

Annotation id: 52623494 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: Oct 20, 2023 10:11:42 am

Annotation id: 52623495 download GFF for this track

Hide

CDDSearch
Date: Oct 20, 2023 10:11:42 am

Annotation id: 52623497 download GFF for this track

Hide

InterProScan
Date: Oct 20, 2023 10:11:42 am

Annotation id: 52623496 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Oct 20, 2023 10:11:42 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NC_013956",
    "start": "168252",
    "end": "185348",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NC_013956_emrld_1",
    "nearest_MiBIG": "BGC0000790",
    "nearest_MiBIG_class": "Saccharide",
    "nearest_MiBIG_diceDistance": "0.544",
    "score": "0.660",
    "partial": "00"
  }
]
 
 

   login to post or reply to a comment