SMC
Version: 1.2.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Polyketide
Source Info
Source: Salinispora tropica CNT250 - tax_id: 1169196 (SMC-108098)
Location: NZ_JHVW01000060.1: 1-2188 (2,187 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 25, 2023 08:35:38 am

Annotation id: 5327161 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 25, 2023 08:35:38 am

Annotation id: 5327155 download GFF for this track

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Emerald
v0.2.4.1
Date: May 25, 2023 08:35:38 am

Annotation id: 5327156 download GFF for this track

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CDDSearch
Date: May 25, 2023 08:35:38 am

Annotation id: 5327160 download GFF for this track

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InterProScan
Date: May 25, 2023 08:35:38 am

Annotation id: 5327157 download GFF for this track

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Comments (1 post)


SMC Bot
May 25, 2023 08:35:38 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_JHVW01000060.1",
    "start": "1",
    "end": "2188",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_JHVW01000060.1_emrld_1",
    "nearest_MiBIG": "BGC0000248",
    "nearest_MiBIG_class": "Polyketide",
    "nearest_MiBIG_diceDistance": "0.222",
    "score": "0.920",
    "partial": "11"
  }
]
 
 

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